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PHP

Implement Bayesian inference using PHP, Part 1
By: developerWorks
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    2005-01-05

    Table of Contents:
  • Implement Bayesian inference using PHP, Part 1
  • Conditional probability
  • Learning from experience
  • Conditional probability and SQL
  • Frequency versus probability format
  • Deriving Bayes Theorem
  • Medical diagnosis wizard
  • Implementing the calculation with Bayes.php
  • Sensitivity analysis
  • Resources

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    Implement Bayesian inference using PHP, Part 1 - Conditional probability


    (Page 2 of 10 )

    A conditional probability refers to the probability of observing an event A given that you have observed a separate event B. The mathematical shorthand for expressing this idea is:

    P(A | B)

    Imagine that A refers to "customer buys product A" and B refers to "customer buys product B". P(A | B) would then read as the "probability that a customer will buy product A given that they have bought product B." If A tends to occur when B occurs, then knowing that B has occurred allows you to assign a higher probability to A's occurrence than in a situation in which you did not know that B occurred.

    More generally, if A and B systematically co-vary in some way, then P(A | B) will not be equal to P(A). Conversely, if A and B are independent events, then P(A | B) would be expected to equal P(A).

    The need to compute a conditional probability thus arises any time you think the occurence of some event has a bearing on the probability of another event's occurring.

    The most basic and intuitive method for computing P(A | B) is the set enumeration method. Using this method, P(A | B) can be computed by counting the number of times A and B occur together {A & B} and dividing by the number of times B occurs {B}:

    P(A | B) = {A & B} / {B}

    If you observe that 12 customers to date bought product B and of those 12, 10 also bought product A, then P(A | B) would be estimated at 10/12 or 0.833. In other words, the probability of a customer buying product A given that they have purchased product B can be estimated at 83 percent by using a method that involves enumerating relative frequencies of A and B events from the data gathered to date.

    You can compute a conditional probability using the set enumeration method with the following PHP code:

    Listing 1. Computing conditional probability using set enumeration

    <?php

    /**
    * Returns conditional probability of $A given $B and $Data.
    * $Data is an indexed array.  Each element of the $Data array
    * consists of an A measurement and B measurment on a sample
    * item.
    */
    function getConditionalProbabilty($A, $B, $Data) {
      $NumAB   = 0;
      $NumB    = 0;
      $NumData = count($Data);
      for ($i=0; $i < $NumData; $i++) {
        if (in_array($B, $Data[$i])) {
          $NumB++;
          if (in_array($A, $Data[$i])) {
            $NumAB++;
          }
        }
      }
      return $NumAB / $NumB;
    }

    ?>

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